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    Author information
    First name: Weida
    Last name: Tong
    DBLP: 53/3185
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    Below you find the publications which have been written by this author.

    Show item 1 to 48 of 48  
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    Conference paper
    Leihong Wu, Zhichao Liu, Scott M. Auerbach, Ruili Huang, Minjun Chen, Kristin McEuen, Joshua Xu, Hong Fang, Weida Tong.
    Integrating Drug's Mode of Action into Quantitative Structure-Activity Relationships for Improved Prediction of Drug-Induced Liver Injury.
    Journal of Chemical Information and Modeling 2017, Volume 57 (0) 2017
    Conference paper
    Hao Zhang, Mary Yang, Xiaoyue Feng, William Yang, Weida Tong, Renchu Guan.
    Protein-Protein Interaction Extraction Using Attention-Based Convolution Neural Networks.
    Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics, BCB 2017, Boston, MA, USA, August 20-23, 2017 2017 (0) 2017
    Conference paper
    Daniel Martin, Hongjian Ding, Leihong Wu, Howard Semey, Amy Barnes, Darryl Langley, Su Inn Park, Zhichao Liu, Weida Tong, Joshua Xu.
    An Image Analysis Environment for Species Identification of Food Contaminating Beetles.
    Proceedings of the Thirtieth AAAI Conference on Artificial Intelligence, February 12-17, 2016, Phoenix, Arizona, USA. 2016 (0) 2016
    Conference paper
    Weizhong Zhao, James J. Chen, Roger Perkins, Yuping Wang, Zhichao Liu, Huixiao Hong, Weida Tong, Wen Zou.
    A novel procedure on next generation sequencing data analysis using text mining algorithm.
    BMC Bioinformatics 2016, Volume 17 (0) 2016
    Conference paper
    Weizhong Zhao, James J. Chen, Roger Perkins, Yuping Wang, Zhichao Liu, Huixiao Hong, Weida Tong, Wen Zou.
    Erratum to: A novel procedure on next generation sequencing data analysis using text mining algorithm.
    BMC Bioinformatics 2016, Volume 17 (0) 2016
    Conference paper
    Mikyung Lee, Zhichao Liu, Ruili Huang, Weida Tong.
    Application of dynamic topic models to toxicogenomics data.
    BMC Bioinformatics 2016, Volume 17 (0) 2016
    Conference paper
    Halil Bisgin, Zhichao Liu, Hong Fang, Reagan Kelly, Xiaowei Xu, Weida Tong.
    A phenome-guided drug repositioning through a latent variable model.
    BMC Bioinformatics 2014, Volume 15 (0) 2014
    Conference paper
    Mikyung Lee, Zhichao Liu, Reagan Kelly, Weida Tong.
    Of text and gene - using text mining methods to uncover hidden knowledge in toxicogenomics.
    BMC Systems Biology 2014, Volume 8 (0) 2014
    Conference paper
    Wenqian Zhang, Joe Meehan, Zhenqiang Su, Hui Wen Ng, Mao Shu, Heng Luo, Weigong Ge, Roger Perkins, Weida Tong, Huixiao Hong.
    Whole genome sequencing of 35 individuals provides insights into the genetic architecture of Korean population.
    BMC Bioinformatics 2014, Volume 15 (0) 2014
    Conference paper
    Ke Yu, Jie Zhang, Minjun Chen, Xiaowei Xu, Ayako Suzuki, Katarina Ilic, Weida Tong.
    Mining hidden knowledge for drug safety assessment: topic modeling of LiverTox as a case study.
    BMC Bioinformatics 2014, Volume 15 (0) 2014
    Conference paper
    William Yang, Kenji Yoshigoe, Xiang Qin, Jun S. Liu, Jack Yang, Andrzej Niemierko, Youping Deng, Yunlong Liu, A. Keith Dunker, Zhongxue Chen, Liangjiang Wang, Dong Xu, Hamid R. Arabnia, Weida Tong, Mary Qu Yang.
    Identification of genes and pathways involved in kidney renal clear cell carcinoma.
    BMC Bioinformatics 2014, Volume 15 (0) 2014
    Conference paper
    Jack Yang, A. Keith Dunker, Jun S. Liu, Xiang Qin, Hamid R. Arabnia, William Yang, Andrzej Niemierko, Zhongxue Chen, Zuojie Luo, Liangjiang Wang, Yunlong Liu, Dong Xu, Youping Deng, Weida Tong, Mary Qu Yang.
    Advances in translational bioinformatics facilitate revealing the landscape of complex disease mechanisms.
    BMC Bioinformatics 2014, Volume 15 (0) 2014
    Conference paper
    Hui Wen Ng, Wenqian Zhang, Mao Shu, Heng Luo, Weigong Ge, Roger Perkins, Weida Tong, Huixiao Hong.
    Competitive molecular docking approach for predicting estrogen receptor subtype α agonists and antagonists.
    BMC Bioinformatics 2014, Volume 15 (0) 2014
    Conference paper
    Huixiao Hong, Qilong Hong, Jie Liu, Weida Tong, Leming Shi.
    Estimating relative noise to signal in DNA microarray data.
    IJBRA 2013, Volume 9 (0) 2013
    Conference paper
    Halil Bisgin, Minjun Chen, Yuping Wang, Reagan Kelly, Hong Fang, Xiaowei Xu, Weida Tong.
    A systems approach for analysis of high content screening assay data with topic modeling.
    BMC Bioinformatics 2013, Volume 14 (0) 2013
    Conference paper
    Jie Shen, Wenqian Zhang, Hong Fang, Roger Perkins, Weida Tong, Huixiao Hong.
    Homology modeling, molecular docking, and molecular dynamics simulations elucidated α-fetoprotein binding modes.
    BMC Bioinformatics 2013, Volume 14 (0) 2013
    Journal article
    Halil Bisgin, Zhichao Liu, Reagan Kelly, Hong Fang, Xiaowei Xu, Weida Tong.
    Investigating drug repositioning opportunities in FDA drug labels through topic modeling.
    BMC Bioinformatics 2012, Volume 13 (0) 2012
    Book chapter
    Zhining Wen, Zhenqiang Su, Jie Liu, Baitang Ning, Lei Guo 0006, Weida Tong, Leming Shi.
    The MicroArray Quality Control (MAQC) Project and Cross-Platform Analysis of Microarray Data.
    Handbook of Statistical Bioinformatics. 2011 (0) 2011
    Journal article
    Halil Bisgin, Zhichao Liu, Hong Fang, Xiaowei Xu, Weida Tong.
    Mining FDA drug labels using an unsupervised learning technique - topic modeling.
    BMC Bioinformatics 2011, Volume 12 (0) 2011
    Conference paper
    Martha VenkataSwamy, Zhichao Liu, Li Guo 0009, Zhenqiang Su, Yanbin Ye, Hong Fang, Don Ding, Weida Tong, Xiaowei Xu.
    Constructing a robust protein-protein interaction network by integrating multiple public databases.
    BMC Bioinformatics 2011, Volume 12 (0) 2011
    Conference paper
    Zhichao Liu, Qiang Shi, Don Ding, Reagan Kelly, Hong Fang, Weida Tong.
    Translating Clinical Findings into Knowledge in Drug Safety Evaluation - Drug Induced Liver Injury Prediction System (DILIps).
    PLoS Computational Biology 2011, Volume 7 (0) 2011
    Conference paper
    Minjun Chen, Leming Shi, Reagan Kelly, Roger Perkins, Hong Fang, Weida Tong.
    Selecting a single model or combining multiple models for microarray-based classifier development? - A comparative analysis based on large and diverse datasets generated from the MAQC-II project.
    BMC Bioinformatics 2011, Volume 12 (0) 2011
    Conference paper
    Philippe Rocca-Serra, Marco Brandizi, Eamonn Maguire, Nataliya Sklyar, Chris F. Taylor, Kimberly Begley, Dawn Field, Stephen C. Harris, Winston Hide, Oliver Hofmann, Steffen Neumann, Peter Sterk, Weida Tong, Susanna-Assunta Sansone.
    ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level.
    Bioinformatics 2010, Volume 26 (0) 2010
    Conference paper
    Don Ding, Lei Xu, Hong Fang, Huixiao Hong, Roger Perkins, Steve Harris, Edward D. Bearden, Leming Shi, Weida Tong.
    The EDKB: an established knowledge base for endocrine disrupting chemicals.
    BMC Bioinformatics 2010, Volume 11 (0) 2010
    Conference paper
    Joshua Xu, Carolyn Wise, Vijayalakshmi Varma, Hong Fang, Baitang Ning, Huixiao Hong, Weida Tong, Jim Kaput.
    Two new ArrayTrack libraries for personalized biomedical research.
    BMC Bioinformatics 2010, Volume 11 (0) 2010
    Conference paper
    Zhining Wen, Charles Wang, Quan Shi, Ying Huang, Zhenqiang Su, Huixiao Hong, Weida Tong, Leming Shi.
    Evaluation of gene expression data generated from expired Affymetrix GeneChip
    BMC Bioinformatics 2010, Volume 11 (0) 2010
    Conference paper
    Hong Fang, Joshua Xu, Don Ding, Scott A. Jackson, Isha R. Patel, Jonathan G. Frye, Wen Zou, Rajesh Nayak, Steven L. Foley, James J. Chen, Zhenqiang Su, Yanbin Ye, Steve Turner, Steve Harris, Guangxu Zhou, Carl Cerniglia, Weida Tong.
    An FDA bioinformatics tool for microbial genomics research on molecular characterization of bacterial foodborne pathogens using microarrays.
    BMC Bioinformatics 2010, Volume 11 (0) 2010
    Journal article
    Huixiao Hong, Qilong Hong, Roger Perkins, Leming Shi, Hong Fang, Zhenqiang Su, Yvonne P. Dragan, James C. Fuscoe, Weida Tong.
    The Accurate Prediction of Protein Family from Amino Acid Sequence by Measuring Features of Sequence Fragments.
    Journal of Computational Biology 2009, Volume 16 (0) 2009
    Conference paper
    Huixiao Hong, Qilong Hong, Weida Tong.
    Accurate Prediction and Recognition of Subfamilies of G Protein-Coupled Receptors from Amino Acid Sequences.
    International Conference on Bioinformatics Computational Biology, BIOCOMP 2009, July 13-16, 2009, Las Vegas Nevada, USA, 2 Volumes 2009 (0) 2009
    Journal article
    Huixiao Hong, Qian Xie, Weigong Ge, Feng Qian, Hong Fang, Leming Shi, Zhenqiang Su, Roger Perkins, Weida Tong.
    Mold
    Journal of Chemical Information and Modeling 2008, Volume 48 (0) 2008
    Conference paper
    Zhenqiang Su, Huixiao Hong, Hong Fang, Leming Shi, Roger Perkins, Weida Tong.
    Very Important Pool (VIP) genes - an application for microarray-based molecular signatures.
    BMC Bioinformatics 2008, Volume 9 (0) 2008
    Conference paper
    Huixiao Hong, Zhenqiang Su, Weigong Ge, Leming Shi, Roger Perkins, Hong Fang, Joshua Xu, James J. Chen, Tao Han, Jim Kaput, James C. Fuscoe, Weida Tong.
    Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples.
    BMC Bioinformatics 2008, Volume 9 (0) 2008
    Conference paper
    Zhenqiang Su, Huixiao Hong, Roger Perkins, Xueguang Shao, Wensheng Cai, Weida Tong.
    Consensus analysis of multiple classifiers using non-repetitive variables: Diagnostic application to microarray gene expression data.
    Computational Biology and Chemistry 2007, Volume 31 (0) 2007
    Conference paper
    Yongxi Tan, Leming Shi, Saber M. Hussain, Jun Xu, Weida Tong, John M. Frazier, Charles Wang.
    Integrating time-course microarray gene expression profiles with cytotoxicity for identification of biomarkers in primary rat hepatocytes exposed to cadmium.
    Bioinformatics 2006, Volume 22 (0) 2006
    Conference paper
    Hongmei Sun, Hong Fang, Tao Chen, Roger Perkins, Weida Tong.
    GOFFA: Gene Ontology For Functional Analysis - A FDA Gene Ontology Tool for Analysis of Genomic and Proteomic Data.
    BMC Bioinformatics 2006, Volume 7 (0) 2006
    Conference paper
    Tao Han, Jianyong Wang, Weida Tong, Martha M. Moore, James C. Fuscoe, Tao Chen.
    Microarray analysis distinguishes differential gene expression patterns from large and small colony
    BMC Bioinformatics 2006, Volume 7 (0) 2006
    Conference paper
    Lei Guo, Hong Fang, Jim Collins, Xiao-hui Fan, Stacey L. Dial, Alex Wong, Kshama Mehta, Ernice Blann, Leming Shi, Weida Tong, Yvonne P. Dragan.
    Differential gene expression in mouse primary hepatocytes exposed to the peroxisome proliferator-activated receptor alpha agonists.
    BMC Bioinformatics 2006, Volume 7 (0) 2006
    Conference paper
    Leming Shi, Weida Tong, Hong Fang, Uwe Scherf, Jing Han, Raj K. Puri, Felix W. Frueh, Federico M. Goodsaid, Lei Guo, Zhenqiang Su, Tao Han, James C. Fuscoe, Z. Alex Xu, Tucker A. Patterson, Huixiao Hong, Qian Xie, Roger Perkins, James J. Chen, Daniel A. Casciano.
    Cross-platform comparability of microarray technology: Intra-platform consistency and appropriate data analysis procedures are essential.
    BMC Bioinformatics 2005, Volume 6 (0) 2005
    Conference paper
    Huixiao Hong, Yvonne P. Dragan, Joshua Epstein, Candee Teitel, Bangzheng Chen, Qian Xie, Hong Fang, Leming Shi, Roger Perkins, Weida Tong.
    Quality control and quality assessment of data from surface-enhanced laser desorption/ionization (SELDI) time-of flight (TOF) mass spectrometry (MS).
    BMC Bioinformatics 2005, Volume 6 (0) 2005
    Conference paper
    Qian Xie, Luke D. Ratnasinghe, Huixiao Hong, Roger Perkins, Ze-Zhong Tang, Nan Hu, Philip R. Taylor, Weida Tong.
    Decision Forest Analysis of 61 Single Nucleotide Polymorphisms in a Case-Control Study of Esophageal Cancer; a novel method.
    BMC Bioinformatics 2005, Volume 6 (0) 2005
    Conference paper
    Hong Fang, Weida Tong, Roger Perkins, Leming Shi, Huixiao Hong, X. Cao, Qian Xie, S. H. Yim, J. M. Ward, Henry C. Pitot, Yvonne P. Dragan.
    Bioinformatics approaches for cross-species liver cancer analysis based on microarray gene expression profiling.
    BMC Bioinformatics 2005, Volume 6 (0) 2005
    Conference paper
    Leming Shi, Weida Tong, Zhenqiang Su, Tao Han, Jing Han, Raj K. Puri, Hong Fang, Felix W. Frueh, Federico M. Goodsaid, Lei Guo, William S. Branham, James J. Chen, Z. Alex Xu, Stephen C. Harris, Huixiao Hong, Qian Xie, Roger Perkins, James C. Fuscoe.
    Microarray scanner calibration curves: characteristics and implications.
    BMC Bioinformatics 2005, Volume 6 (0) 2005
    Conference paper
    Yongxi Tan, Leming Shi, Weida Tong, G. T. Gene Hwang, Charles Wang.
    Multi-class tumor classification by discriminant partial least squares using microarray gene expression data and assessment of classification models.
    Computational Biology and Chemistry 2004, Volume 28 (0) 2004
    Conference paper
    Yiyu Cheng, Minjun Chen, Weida Tong.
    An Approach to Comparative Analysis of Chromatographic Fingerprints for Assuring the Quality of Botanical Drugs.
    Journal of Chemical Information and Computer Sciences 2003, Volume 43 (0) 2003
    Conference paper
    Weida Tong, Huixiao Hong, Hong Fang, Qian Xie, Roger Perkins.
    Decision Forest: Combining the Predictions of Multiple Independent Decision Tree Models.
    Journal of Chemical Information and Computer Sciences 2003, Volume 43 (0) 2003
    Conference paper
    Leming Shi, Hong Fang, Weida Tong, Jie Wu, Roger Perkins, Robert M. Blair, William S. Branham, Stacey L. Dial, Carrie L. Moland, Daniel M. Sheehan.
    QSAR Models Using a Large Diverse Set of Estrogens.
    Journal of Chemical Information and Computer Sciences 2001, Volume 41 (0) 2001
    Conference paper
    Weida Tong, David R. Lowis, Roger Perkins, Yu Chen, William J. Welsh, Dean W. Goddette, Trevor W. Heritage, Daniel M. Sheehan.
    Evaluation of Quantitative Structure-Activity Relationship Methods for Large-Scale Prediction of Chemicals Binding to the Estrogen Receptor.
    Journal of Chemical Information and Computer Sciences 1998, Volume 38 (0) 1998
    Conference paper
    Weida Tong, Valerian T. D'Souza.
    The Role of the Carboxylate Ion in Models of Acyl-Chymotrypsin.
    Journal of Computational Chemistry 1995, Volume 16 (0) 1995
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