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    Author information
    First name: Leming
    Last name: Shi
    DBLP: 62/5505
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    Below you find the publications which have been written by this author.

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    Conference paper
    Christopher J. Mitchell, Derese Getnet, Min Sik Kim, Srinivas Manda Srikanth, Praveen Kumar, Tai-Chung Huang, Sneha M. Pinto, Nirujogi Raja Sekhar, Mio Iwasaki, Patrick G. Shaw, Xinyan Wu, Jun Zhong, Raghothama Chaerkady, Arivusudar Marimuthu, Babylakshmi Muthusamy, Nandini A. Sahasrabuddhe, Rajesh Raju, Caitlyn Bowman, Ludmila V. Danilova, Jevon Cutler, Dhanashree S. Kelkar, Charles G. Drake, T. S. Keshava Prasad, Luigi Marchionni, Peter N. Murakami, Alan F. Scott, Leming Shi, Jean Thierry-Mieg, Danielle Thierry-Mieg, Rafael A. Irizarry, Leslie Cope, Yasushi Ishihama, Charles Wang, Harsha Gowda, Akhilesh Pandey.
    A multi-omic analysis of human naïve CD4+ T cells.
    BMC Systems Biology 2015, Volume 9 (0) 2015
    Conference paper
    Huixiao Hong, Qilong Hong, Jie Liu, Weida Tong, Leming Shi.
    Estimating relative noise to signal in DNA microarray data.
    IJBRA 2013, Volume 9 (0) 2013
    Journal article
    Jie Cheng, Joel Greshock, Leming Shi, Shu Zheng, Alan Menius, Kwan Lee.
    Good practice guidelines for biomarker discovery from array data: a case study for breast cancer prognosis.
    BMC Systems Biology 2013, Volume 7 (0) 2013
    Conference paper
    Jie Cheng, Joel Greshock, Leming Shi, Jeffery Painter, Xiwu Lin, Kwan Lee, Shu Zheng, Richard Wooster, Lajos Pusztai, Alan Menius.
    An adaptive feature selection method for microarray data analysis.
    2012 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2012, Philadelphia, PA, USA, October 4-7, 2012 2012 (0) 2012
    Conference paper
    Lun Yang, Kejian Wang, Jian Chen, Anil G. Jegga, Heng Luo, Leming Shi, Chunling Wan, Xizhi Guo, Shengying Qin, Guang He, Guoyin Feng, Lin He.
    Exploring Off-Targets and Off-Systems for Adverse Drug Reactions via Chemical-Protein Interactome - Clozapine-Induced Agranulocytosis as a Case Study.
    PLoS Computational Biology 2011, Volume 7 (0) 2011
    Conference paper
    Minjun Chen, Leming Shi, Reagan Kelly, Roger Perkins, Hong Fang, Weida Tong.
    Selecting a single model or combining multiple models for microarray-based classifier development? - A comparative analysis based on large and diverse datasets generated from the MAQC-II project.
    BMC Bioinformatics 2011, Volume 12 (0) 2011
    Book chapter
    Zhining Wen, Zhenqiang Su, Jie Liu, Baitang Ning, Lei Guo 0006, Weida Tong, Leming Shi.
    The MicroArray Quality Control (MAQC) Project and Cross-Platform Analysis of Microarray Data.
    Handbook of Statistical Bioinformatics. 2011 (0) 2011
    Conference paper
    Don Ding, Lei Xu, Hong Fang, Huixiao Hong, Roger Perkins, Steve Harris, Edward D. Bearden, Leming Shi, Weida Tong.
    The EDKB: an established knowledge base for endocrine disrupting chemicals.
    BMC Bioinformatics 2010, Volume 11 (0) 2010
    Conference paper
    Zhining Wen, Charles Wang, Quan Shi, Ying Huang, Zhenqiang Su, Huixiao Hong, Weida Tong, Leming Shi.
    Evaluation of gene expression data generated from expired Affymetrix GeneChip
    BMC Bioinformatics 2010, Volume 11 (0) 2010
    Conference paper
    Zhiguang Li, Zhenqiang Su, Zhining Wen, Leming Shi, Tao Chen.
    Microarray platform consistency is revealed by biologically functional analysis of gene expression profiles.
    BMC Bioinformatics 2009, Volume 10 (0) 2009
    Journal article
    Huixiao Hong, Qilong Hong, Roger Perkins, Leming Shi, Hong Fang, Zhenqiang Su, Yvonne P. Dragan, James C. Fuscoe, Weida Tong.
    The Accurate Prediction of Protein Family from Amino Acid Sequence by Measuring Features of Sequence Fragments.
    Journal of Computational Biology 2009, Volume 16 (0) 2009
    Journal article
    Huixiao Hong, Qian Xie, Weigong Ge, Feng Qian, Hong Fang, Leming Shi, Zhenqiang Su, Roger Perkins, Weida Tong.
    Mold
    Journal of Chemical Information and Modeling 2008, Volume 48 (0) 2008
    Conference paper
    Zhenqiang Su, Huixiao Hong, Hong Fang, Leming Shi, Roger Perkins, Weida Tong.
    Very Important Pool (VIP) genes - an application for microarray-based molecular signatures.
    BMC Bioinformatics 2008, Volume 9 (0) 2008
    Conference paper
    Leming Shi, Wendell D. Jones, Roderick V. Jensen, Stephen C. Harris, Roger Perkins, Federico M. Goodsaid, Lei Guo, Lisa J. Croner, Cecilie Boysen, Hong Fang, Feng Qian, Shashi Amur, Wenjun Bao, Catalin C. Barbacioru, Vincent Bertholet, Xiaoxi Megan Cao, Tzu-Ming Chu, Patrick J. Collins, Xiao-hui Fan, Felix W. Frueh.
    The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies.
    BMC Bioinformatics 2008, Volume 9 (0) 2008
    Conference paper
    Huixiao Hong, Zhenqiang Su, Weigong Ge, Leming Shi, Roger Perkins, Hong Fang, Joshua Xu, James J. Chen, Tao Han, Jim Kaput, James C. Fuscoe, Weida Tong.
    Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples.
    BMC Bioinformatics 2008, Volume 9 (0) 2008
    Conference paper
    Yongxi Tan, Leming Shi, Saber M. Hussain, Jun Xu, Weida Tong, John M. Frazier, Charles Wang.
    Integrating time-course microarray gene expression profiles with cytotoxicity for identification of biomarkers in primary rat hepatocytes exposed to cadmium.
    Bioinformatics 2006, Volume 22 (0) 2006
    Conference paper
    Tao Chen, Lei Guo, Lu Zhang 0013, Leming Shi, Hong Fang, Yongming Sun, James C. Fuscoe, Nan Mei.
    Gene Expression Profiles Distinguish the Carcinogenic Effects of Aristolochic Acid in Target (Kidney) and Non-target (Liver) Tissues in Rats.
    BMC Bioinformatics 2006, Volume 7 (0) 2006
    Conference paper
    Tao Han, Cathy D. Melvin, Leming Shi, William S. Branham, Carrie L. Moland, P. Scott Pine, Karol L. Thompson, James C. Fuscoe.
    Improvement in the Reproducibility and Accuracy of DNA Microarray Quantification by Optimizing Hybridization Conditions.
    BMC Bioinformatics 2006, Volume 7 (0) 2006
    Conference paper
    Nan Mei, Lei Guo, Lu Zhang 0013, Leming Shi, Yongming Andrew Sun, Chris Fung, Carrie L. Moland, Stacey L. Dial, James C. Fuscoe, Tao Chen.
    Analysis of gene expression changes in relation to toxicity and tumorigenesis in the livers of Big Blue transgenic rats fed comfrey (
    BMC Bioinformatics 2006, Volume 7 (0) 2006
    Conference paper
    Lei Guo, Hong Fang, Jim Collins, Xiao-hui Fan, Stacey L. Dial, Alex Wong, Kshama Mehta, Ernice Blann, Leming Shi, Weida Tong, Yvonne P. Dragan.
    Differential gene expression in mouse primary hepatocytes exposed to the peroxisome proliferator-activated receptor alpha agonists.
    BMC Bioinformatics 2006, Volume 7 (0) 2006
    Conference paper
    Leming Shi, Weida Tong, Hong Fang, Uwe Scherf, Jing Han, Raj K. Puri, Felix W. Frueh, Federico M. Goodsaid, Lei Guo, Zhenqiang Su, Tao Han, James C. Fuscoe, Z. Alex Xu, Tucker A. Patterson, Huixiao Hong, Qian Xie, Roger Perkins, James J. Chen, Daniel A. Casciano.
    Cross-platform comparability of microarray technology: Intra-platform consistency and appropriate data analysis procedures are essential.
    BMC Bioinformatics 2005, Volume 6 (0) 2005
    Conference paper
    Huixiao Hong, Yvonne P. Dragan, Joshua Epstein, Candee Teitel, Bangzheng Chen, Qian Xie, Hong Fang, Leming Shi, Roger Perkins, Weida Tong.
    Quality control and quality assessment of data from surface-enhanced laser desorption/ionization (SELDI) time-of flight (TOF) mass spectrometry (MS).
    BMC Bioinformatics 2005, Volume 6 (0) 2005
    Conference paper
    Hong Fang, Weida Tong, Roger Perkins, Leming Shi, Huixiao Hong, X. Cao, Qian Xie, S. H. Yim, J. M. Ward, Henry C. Pitot, Yvonne P. Dragan.
    Bioinformatics approaches for cross-species liver cancer analysis based on microarray gene expression profiling.
    BMC Bioinformatics 2005, Volume 6 (0) 2005
    Conference paper
    Zengjun Xu, Tucker A. Patterson, Jonathan D. Wren, Tao Han, Leming Shi, Helen Duhart, Syed F. Ali, William Slikker Jr..
    A microarray study of MPP
    BMC Bioinformatics 2005, Volume 6 (0) 2005
    Conference paper
    Leming Shi, Weida Tong, Zhenqiang Su, Tao Han, Jing Han, Raj K. Puri, Hong Fang, Felix W. Frueh, Federico M. Goodsaid, Lei Guo, William S. Branham, James J. Chen, Z. Alex Xu, Stephen C. Harris, Huixiao Hong, Qian Xie, Roger Perkins, James C. Fuscoe.
    Microarray scanner calibration curves: characteristics and implications.
    BMC Bioinformatics 2005, Volume 6 (0) 2005
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