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First name:	Rui
Last name:	Yamaguchi
DBLP:	92/7043
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	Journal article Kotoe Katayama, Rui Yamaguchi, Seiya Imoto, Keiko Matsuura, Kenji Watanabe. Connection between traditional medicine and disease.	SIGHIT Record 2012, Volume 2	(0)	2012
	Conference paper Shuichi Kawano, Teppei Shimamura, Atsushi Niida, Seiya Imoto, Rui Yamaguchi, Masao Nagasaki, Ryo Yoshida, Cristin G. Print, Satoru Miyano. Identifying Gene Pathways Associated with Cancer Characteristics via Sparse Statistical Methods.	IEEE/ACM Trans. Comput. Biology Bioinform. 2012, Volume 9	(0)	2012
	Journal article Ritsuko Onuki, Ryo Yamada, Rui Yamaguchi, Minoru Kanehisa, Tetsuo Shibuya. Population Model-Based Inter-Diplotype Similarity Measure for Accurate Diplotype Clustering.	Journal of Computational Biology 2012, Volume 19	(0)	2012
	Conference paper Kotoe Katayama, Seiya Imoto, Kenji Watanabe, Rui Yamaguchi, Keiko Matsuura, Satoru Miyano. Analysis of questionnaire for traditional medical and develop decision support system.	2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2012, Philadelphia, USA, October 4-7, 2012 2012	(0)	2012
	Journal article André Fujita, João Ricardo Sato, Marcos Angelo Almeida Demasi, Rui Yamaguchi, Teppei Shimamura, Carlos Eduardo Ferreira, Mari Cleide Sogayar, Satoru Miyano. Inferring Contagion in Regulatory Networks.	IEEE/ACM Trans. Comput. Biology Bioinform. 2011, Volume 8	(0)	2011
	Conference paper Yoshinori Tamada, Rui Yamaguchi, Seiya Imoto, Osamu Hirose, Ryo Yoshida, Masao Nagasaki, Satoru Miyano. SiGN-SSM: open source parallel software for estimating gene networks with state space models.	Bioinformatics 2011, Volume 27	(0)	2011
	Conference paper Takanori Hasegawa, Rui Yamaguchi, Masao Nagasaki, Seiya Imoto, Satoru Miyano. Comprehensive Pharmacogenomic Pathway Screening by Data Assimilation.	Bioinformatics Research and Applications - 7th International Symposium, ISBRA 2011, Changsha, China, May 27-29, 2011. Proceedings 2011	(0)	2011
	Conference paper Takanori Hasegawa, Rui Yamaguchi, Masao Nagasaki, Seiya Imoto, Satoru Miyano. Poster: Comprehensive pharmacogenomic pathway screening by data assimilation.	IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2011, Orlando, FL, USA, February 3-5, 2011 2011	(0)	2011
	Conference paper Masaya M. Saito, Seiya Imoto, Rui Yamaguchi, Satoru Miyano, Tomoyuki Higuchi. Parallel Agent-Based Simulator for Influenza Pandemic.	Advanced Agent Technology - AAMAS 2011 Workshops, AMPLE, AOSE, ARMS, DOCM3AS, ITMAS, Taipei, Taiwan, May 2-6, 2011. Revised Selected Papers 2012	(0)	2011
	Journal article Kotoe Katayama, Rui Yamaguchi, Seiya Imoto, Keiko Matsuura, Kenji Watanabe, Satoru Miyano. Clustering for Visual Analogue Scale Data in Symbolic Data Analysis.	Procedia CS 2011, Volume 6	(0)	2011
	Conference paper Kotoe Katayama, Rui Yamaguchi, Seiya Imoto, Keiko Matsuura, Kenji Watanabe, Satoru Miyano. Transform of visual analogue scale data and their clustering.	IJKESDP 2011, Volume 3	(0)	2011
	Conference paper Tomoya Higashigaki, Kaname Kojima, Rui Yamaguchi, Masato Inoue, Seiya Imoto, Satoru Miyano. Identifying Hidden Confounders in Gene Networks by Bayesian Networks.	10th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2010, Philadelphia, Pennsylvania, USA, May 31-June 3 2010 2010	(0)	2010
	Conference paper Atsushi Niida, Seiya Imoto, Rui Yamaguchi, Masao Nagasaki, André Fujita, Teppei Shimamura, Satoru Miyano. Model-free unsupervised gene set screening based on information enrichment in expression profiles.	Bioinformatics 2010, Volume 26	(0)	2010
	Conference paper Shuichi Kawano, Teppei Shimamura, Atsushi Niida, Seiya Imoto, Rui Yamaguchi, Masao Nagasaki, Ryo Yoshida, Cristin G. Print, Satoru Miyano. Discovering functional gene pathways associated with cancer heterogeneity via sparse supervised learning.	2010 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2010, Hong Kong, China, 18 - 21 December 2010, Proceedings 2010	(0)	2010
	Journal article Teppei Shimamura, Seiya Imoto, Rui Yamaguchi, Masao Nagasaki, Satoru Miyano. Inferring dynamic gene networks under varying conditions for transcriptomic network comparison.	Bioinformatics 2010, Volume 26	(0)	2010
	Conference paper Satoru Miyano, Rui Yamaguchi, Yoshinori Tamada, Masao Nagasaki, Seiya Imoto. Gene Networks Viewed through Two Models.	Bioinformatics and Computational Biology, First International Conference, BICoB 2009, New Orleans, LA, USA, April 8-10, 2009. Proceedings 2009	(0)	2009
	Journal article Rui Yamaguchi, Seiya Imoto, Satoru Miyano. Network-Based Predictions and Simulations by Biological State Space Models: Search for Drug Mode of Action.	J. Comput. Sci. Technol. 2009, Volume 25	(0)	2009
	Conference paper Osamu Hirose, Ryo Yoshida, Rui Yamaguchi, Seiya Imoto, Tomoyuki Higuchi, Satoru Miyano. Analyzing Time Course Gene Expression Data with Biological and Technical Replicates to Estimate Gene Networks by State Space Models.	Second Asia International Conference on Modelling and Simulation (AMS 2008), Kuala Lumpur, Malaysia, 13-15 May, 2008 2008	(0)	2008
	Conference paper Osamu Hirose, Ryo Yoshida, Seiya Imoto, Rui Yamaguchi, Tomoyuki Higuchi, Stephen D. Charnock-Jones, Cristin G. Print, Satoru Miyano. Statistical inference of transcriptional module-based gene networks from time course gene expression profiles by using state space models.	Bioinformatics 2008, Volume 24	(0)	2008
	Conference paper Ryo Yoshida, Masao Nagasaki, Rui Yamaguchi, Seiya Imoto, Satoru Miyano, Tomoyuki Higuchi. Bayesian learning of biological pathways on genomic data assimilation.	Bioinformatics 2008, Volume 24	(0)	2008
	Conference paper Pramod K. Gupta, Ryo Yoshida, Seiya Imoto, Rui Yamaguchi, Satoru Miyano. Statistical Absolute Evaluation of Gene Ontology Terms with Gene Expression Data.	Bioinformatics Research and Applications, Third International Symposium, ISBRA 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings 2007	(0)	2007
	Conference paper Rui Yamaguchi, Tomoyuki Higuchi. State-space approach with the maximum likelihood principle to identify the system generating time-course gene expression data of yeast.	IJDMB 2007, Volume 1	(0)	2006
	Conference paper Rui Yamaguchi, Satoru Yamashita, Tomoyuki Higuchi. Estimating Gene Networks with cDNA Microarray Data Using State-Space Models.	Computational Science and Its Applications - ICCSA 2005, International Conference, Singapore, May 9-12, 2005, Proceedings, Part III 2005	(0)	2005

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